qsirecon.workflows.base module

qsirecon.workflows.base.init_qsirecon_wf()

Organize the execution of qsirecon, with a sub-workflow for each subject.

qsirecon.workflows.base.init_single_subject_recon_wf(subject_id)

Organize the reconstruction pipeline for a single subject.

Reconstruction is performed using a separate workflow for each dwi series.

Parameters:

subject_id (str) – Single subject label

qsirecon.workflows.base.spec_needs_to_template_transform(recon_spec)

Determine whether a recon spec needs a transform from T1wACPC to a template.